BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB031D12LP1|AL429397
(949 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1678 1766 0.0
>3x_Contig1678
Length = 12472
Score = 1766 bits (889), Expect = 0.0
Identities = 923/932 (99%), Gaps = 3/932 (0%)
Strand = Plus / Plus
Query: 17 gatcctaagttaactctcttcctcttcgctacctaaaagatacaatgttccgcctatctg 76
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 785 gatcctaagtgaactctcttcctcttcgctacctaaaagatacaatgttccgcctatctg 844
Query: 77 ggcaagaaaatggaaacctactgtcaaggctttacaagccattgattcttcaaatcttaa 136
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 845 ggcaagaaaatggaaacctactgtcaaggctttacaagccattgattcttcaaatcttaa 904
Query: 137 acttgacgactctattttaggatttattccagaagatgacttgacaaaatccgtccaaga 196
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 905 acttgacgactctattttaggatttattccagaagatgacttgacaaaatccgtccaaga 964
Query: 197 ttggatttatgctacgttgattgcagtngaaccggaactaaggcaattcattgaagtgga 256
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 965 ttggatttatgctacgttgattgcagtagaaccggaactaaggcaattcattgaagtgga 1024
Query: 257 aatgaaatacggtcttatcattgatccatcgacctctaatcgtgttaaccctccggtgtc 316
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1025 aatgaaatacggtcttatcattgatccatcgacctctaatcgtgttaaccctccggtgtc 1084
Query: 317 ctctcaatgcgttttcacagatcttgactccacaatgaagccggatgttgatgaaagagt 376
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1085 ctctcaatgcgttttcacagatcttgactccacaatgaagccggatgttgatgaaagagt 1144
Query: 377 ttttgatgagttcaacagatacataaagaacttatctgaattaaatgaaaatatgggaaa 436
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1145 ttttgatgagttcaacagatacataaagaacttatctgaattaaatgaaaatatgggaaa 1204
Query: 437 gtttaatataatagattctcatgcctcagacttgagccatagagtaagaactcatacgga 496
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1205 gtttaatataatagattctcatgcctcagacttgagctatagagtaagaactcatacgga 1264
Query: 497 aaggccgaagtttttgagaatgacaagagatgttaacaccggaagaattgcacaatttat 556
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1265 aaggccgaagtttttgagaatgacaagagatgttaacaccggaagaattgcacaatttat 1324
Query: 557 tgaaaaacggaaaatttcacagattttattgtactccccaaaggatagttatgataccaa 616
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1325 tgaaaaacggaaaatttcacagattttattgtactccccaaaggatagttatgataccaa 1384
Query: 617 gatttcaatcagtttggaactgcctgttcccgaaaatgatccacctgamaagtacaagaa 676
||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||
Sbjct: 1385 gatttcaatcagtttggaactgcctgtacccgaaaatgatccacctgaaaagtacaagaa 1444
Query: 677 ccatactccaacaggtcatcgtttaaagaaacgtaccagttacatccataatgactcttg 736
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1445 ccatactccaacaggtcatcgtttaaagaaacgtaccagttacatccataatgactcttg 1504
Query: 737 taccagatttgatatcactagggtggaaaataaacctattagagtcaataacaaaaatga 796
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1505 taccagatttgatatcactagggtggaaaataaacctattagagtcaataacaaaaatga 1564
Query: 797 aaaagaacctgaatctgatacaacgtacgaagttgaactggaaatcaatacacctgccct 856
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1565 aaaagaacctgaatctgatacaacgtacgaagttgaactggaaatcaatacacctgccct 1624
Query: 857 cttaaatgcttttgataacattcaacatgatagtaaagaatatgcagctatcgtgag-ac 915
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 1625 cttaaatgcttttgataacattcaacatgatagtaaagaatatgcagctatcgtgagaac 1684
Query: 916 ctttttgaat-acggta-cmttgtaagaagga 945
|||||||||| |||||| | ||||||||||||
Sbjct: 1685 ctttttgaataacggtaccattgtaagaagga 1716
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8225
Number of Sequences: 1807
Number of extensions: 8225
Number of successful extensions: 53
Number of sequences better than 1.0e-20: 1
length of query: 949
length of database: 10,358,551
effective HSP length: 16
effective length of query: 933
effective length of database: 10,329,639
effective search space: 9637553187
effective search space used: 9637553187
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)